Computes the multiple imputation parameter estimate using the emmeans package.
meanImp_emmeans(ind, peptide = 1, tabdata, metacond)
ind | index |
---|---|
peptide | name of the peptide |
tabdata | dataset |
metacond | a factor to specify the groups |
A vector.
M. Chion, Ch. Carapito and F. Bertrand (2021). Accounting for multiple imputation-induced variability for differential analysis in mass spectrometry-based label-free quantitative proteomics. arxiv:2108.07086. https://arxiv.org/abs/2108.07086.
library(mi4p) data(datasim) datasim_imp <- multi.impute(data = datasim[,-1], conditions = attr(datasim,"metadata")$Condition, method = "MLE") meanImp_emmeans(1,1,datasim_imp,attr(datasim,"metadata")$Condition)#> [1] 99.02599 200.23868